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Musaceae Statistics

GNPAnnot Musaceae Statistics
Unique Name Clone Name Alias Accession Number Length (bp) Genes Count Gene Density %Gene Curated Genes Count %Curated Genes (scaffold length) %Curated Genes (overall genes) TE Count TE Density %TE Curated TE Count Curated TE Density %Curated TE (overall TE) Gag-Pol Count
scaffold_0001 Ma4001J14 MA4-1J14 AC226035 104637 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0002 Ma4001C21 MA4-1C21   145629 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0005 Ma4071P20 MA4-71P20 AC226045 95242 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0006 Ma4002G17 2G17 AC226036 37847 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0012 Ma4003F03 MA4-3F3 AC226038 124825 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0013 Ma4004L11 MA4-4L11 AC226041 58704 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0015 Ma4003G18 MA4-3G18 AC226039 86265 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0016 Ma4009F20 MA4-9F20 AC226049 92303 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0017 Ma4042M13 MA4_42M13 AC186749 29567 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0018 Ma4052N02 MA4-52N2 AC226042 73023 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0019 MbP071C19 MBP_71C19 AP009325 133041 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0023 Ma4057L19 MA4-57L19 AC226043 95303 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0025 Ma4069C10 MA4-69C10 AC226044 74174 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0027 MbP064B17 MBP-64B17 AC226052 198395 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0029 MbP094I16 MBP_94I16 AP009326 119244 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0030 MbP091N22 MBP_91N22 AC186755 154246 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0031 MbP006L16 MBP-6L16 AC226053 136446 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0032 MbP081C12 MBP_81C12 AC186754 142973 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0033 MbP008E04 MBP-8E4 AC226055 106121 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0034 Ma4111B14 MA4_111B14 AC186954 144091 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0035 Ma4054B05 MA4_54B05 AC186753 54106 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0036 Ma4099N22 MA4-99N22 AC226048 134662 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0037 Ma4008L21 MA4_8L21 AC186748 113519 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0038 Ma4005B18 MA4-5B18   81560 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0039 Ma4078I12 MA4_78I12 AC186750 148170 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0040 Ma4002N14 MA4-2N14   62242 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0041 Ma4007O19 MA4-7O19   127062 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0042 Ma4009J11 MA4-9J11   74122 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0043 MbP031O07 MBP_31O07 AP009334 131526 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0044 MBP-29H14 MbP029H14   104015 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0045 MaC088K20 MAC-88K20 AC226051 152711 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0046 Ma4082I11 MA4_82I11 AC186955 102232 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0047 Ma4086B03 MA4-86B3 AC226047 87766 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0048 C4BAMMuG9 C4BAM-MuG9   73268 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0049 C4BAMMuH9 C4BAM-MuH9   82723 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0050 Ma4011M06 MA4-11M6 AC226031 61335 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0051 Ma4012B06 MA4-12B6 AC226032 91293 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0052 Ma4017L09 MA4-17L9 AC226033 92078 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0053 Ma4018J06 MA4-18J6 AC226034 76327 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0054 Ma4025J11 MA4_25J11 AC186746 105019 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0055 Ma4030C11 MA4-30C11 AC226037 71163 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0056 Ma4048G03 MA4-48G3 AC226040 108948 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0057 Ma4054N07 MA4_54N07 AC186751 96443 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0058 Ma4064C22 MA4_64C22 AC186752 80932 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0059 Ma4072F16 MA4-72F16 AC226046 180124 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0060 Ma4106O17 MA4_106O17 AC186747 141025 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0061 Ma4112I10 MA4_112I10 AC186756 102441 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0062 Ma4125A12 MA4-125A12 AC226196 110853 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
scaffold_0064 MaC077E20 MAC-77E20 AC226050 177729 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0
Overall: 49 scaffolds 5177470 0 n/a n/a 0 n/a n/a 0 n/a n/a 0 n/a n/a 0

Calculation details:

  • genes count excludes transposable element genes (Gag-Pol);
  • genes length excludes transposable element genes (Gag-Pol) and transposable elements inside introns;
  • genes density is given by the formula: scaffold length / genes count
  • percent of genes is given by the formula: overall genes length / scaffold length;
  • percent of curated genes over scaffold length is given by the formula: overall curated genes length / scaffold length
  • percent of curated genes over all genes is given by the formula: curated genes count / genes count
  • transposable elements density is given by the formula: scaffold length / transposable elements count
  • percent of transposable elements is given by the formula: overall transposable elements length / scaffold length
  • percent of curated transposable elements over all transposable elements is given by the formula: curated transposable elements count / transposable elements count

Note: these statistics are restricted to public data only.